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pyEpiAneufinder documentation
pyEpiAneufinder documentation

Contents

  • Installation
  • Quickstart
    • Executing the Program
    • Splitting Cells Into Clones
    • Calculating Karyogram Metrics
    • Calculating CNV Burden Per Cell
    • Coverage Profiles Per Cell
  • Input and Output
  • API Reference
  • Revision Log
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QuickstartΒΆ

This section walks through the main pyEpiAneufinder workflow using the bundled example dataset and the primary public helper functions documented for the first release.

  • Executing the Program
  • Splitting Cells Into Clones
  • Calculating Karyogram Metrics
  • Calculating CNV Burden Per Cell
  • Coverage Profiles Per Cell
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Executing the Program
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